TAP GARP_ARR-B in Spirogyra sp.

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Zygnemophyceae; Zygnematophycidae; Zygnematales; Zygnemataceae; Spirogyra; unclassified Spirogyra

Protein source: Delaux et al. (2015) Proc Natl Acad Sci U S A 112:13390-5


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules


(Domain names are clickable)
Please note: One of the domains G2-like_Domain and Myb_DNA-binding are sufficient for a protein to be classified as TAP GARP_ARR-B.


List of proteins (5)

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namename additionClick button to show/hide sequence: Download sequence?
c0_seq1_4[519 - 2465] len=2574 path=[1:0-2573]
c1_seq1_14_rccomp8781_c1_seq1_14 [3352 - 434] (REVERSE SENSE) len=4060 path=[3871:0-3394 7266:3395-3484 10602:3485-3651 7356:3652-3729 7434:3730-3749 7454:3750-4059]
c1_seq2_14_rccomp8781_c1_seq2_14 [3352 - 434] (REVERSE SENSE) len=4040 path=[3871:0-3394 7266:3395-3484 10602:3485-3651 7356:3652-3729 7454:3730-4039]
c1_seq3_13_rccomp8781_c1_seq3_13 [3352 - 434] (REVERSE SENSE) len=3893 path=[3871:0-3394 7266:3395-3484 7356:3485-3562 7434:3563-3582 7454:3583-3892]
c1_seq4_12_rccomp8781_c1_seq4_12 [3352 - 434] (REVERSE SENSE) len=3873 path=[3871:0-3394 7266:3395-3484 7356:3485-3562 7454:3563-3872]
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum